2026
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Samet Tenekeci; Efe Sezgin; Selma Tekir A Contrastive Learning Framework for Efficient Viral Escape Prediction Journal Article IEEE Transactions on Computational Biology and Bioinformatics, 23 (3), pp. 1277–1289, 2026, ISSN: 2998-4165. Links | BibTeX @article{Tenekeci2026,
title = {A Contrastive Learning Framework for Efficient Viral Escape Prediction},
author = {Samet Tenekeci and Efe Sezgin and Selma Tekir},
url = {http://dx.doi.org/10.1109/TCBBIO.2026.3674782},
doi = {10.1109/tcbbio.2026.3674782},
issn = {2998-4165},
year = {2026},
date = {2026-01-01},
journal = {IEEE Transactions on Computational Biology and Bioinformatics},
volume = {23},
number = {3},
pages = {1277\textendash1289},
publisher = {Institute of Electrical and Electronics Engineers (IEEE)},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Samet Tenekeci; Hüseyin Ünlü; Burak Keçeci; Muhammed Efe İncir; Onur Demirörs Automated software size measurement using multilingual domain-adapted language models Journal Article TURKISH JOURNAL OF ELECTRICAL ENGINEERING & COMPUTER SCIENCES, 34 (2), pp. 234-247, 2026. Links | BibTeX @article{tenekeci2026b,
title = {Automated software size measurement using multilingual domain-adapted language models},
author = {Samet Tenekeci and H\"{u}seyin \"{U}nl\"{u} and Burak Ke\c{c}eci and Muhammed Efe \.{I}ncir and Onur Demir\"{o}rs},
url = {https://doi.org/10.55730/1300-0632.4172},
doi = {10.55730/1300-0632.4172},
year = {2026},
date = {2026-01-01},
journal = {TURKISH JOURNAL OF ELECTRICAL ENGINEERING & COMPUTER SCIENCES},
volume = {34},
number = {2},
pages = {234-247},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2025
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Samet Tenekeci; Hüseyin Ünlü; Bedir Arda Gül; Damla Keleş; Murat Küçük; Onur Demirörs Automating software size measurement from python code using language models Journal Article Automated Software Engineering, 33 (1), 2025. Links | BibTeX @article{tenekeci2025,
title = {Automating software size measurement from python code using language models},
author = {Samet Tenekeci and H\"{u}seyin \"{U}nl\"{u} and Bedir Arda G\"{u}l and Damla Kele\c{s} and Murat K\"{u}\c{c}\"{u}k and Onur Demir\"{o}rs},
url = {https://doi.org/10.1007/s10515-025-00571-z},
doi = {10.1007/s10515-025-00571-z},
year = {2025},
date = {2025-01-01},
journal = {Automated Software Engineering},
volume = {33},
number = {1},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Hüseyin Ünlü; Samet Tenekeci; Dhia Eddine Kennouche; Onur Demirörs Automating software size measurement with language models: Insights from industrial case studies Journal Article Journal of Systems and Software, 231 , pp. 112638, 2025. Links | BibTeX @article{unlu2025,
title = {Automating software size measurement with language models: Insights from industrial case studies},
author = {H\"{u}seyin \"{U}nl\"{u} and Samet Tenekeci and Dhia Eddine Kennouche and Onur Demir\"{o}rs},
url = {https://doi.org/10.1016/j.jss.2025.112638},
doi = {10.1016/j.jss.2025.112638},
year = {2025},
date = {2025-01-01},
journal = {Journal of Systems and Software},
volume = {231},
pages = {112638},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2024
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Samet Tenekeci; Hüseyin Ünlü; Emre Dikenelli; Uğurcan Selçuk; Görkem Kılınç Soylu; Onur Demirörs Predicting Software Size and Effort from Code Using Natural Language Processing Inproceedings IWSM-Mensura, Montréal, Canada, 2024, (September 30 - October 4, 2024). Links | BibTeX @inproceedings{tenekeci2024predicting,
title = {Predicting Software Size and Effort from Code Using Natural Language Processing},
author = {Samet Tenekeci and H\"{u}seyin \"{U}nl\"{u} and Emre Dikenelli and U{\u{g}}urcan Sel{\c{c}}uk and G\"{o}rkem K{ı}l{ı}n{\c{c}} Soylu and Onur Demir\"{o}rs},
url = {https://ceur-ws.org/Vol-3852/paper1.pdf},
year = {2024},
date = {2024-10-05},
booktitle = {IWSM-Mensura},
volume = {3852},
address = {Montr\'{e}al, Canada},
series = {CEUR Workshop Proceedings},
note = {September 30 - October 4, 2024},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
|
Samet Tenekeci; Selma Tekir Identifying promoter and enhancer sequences by graph convolutional
networks Journal Article Comput. Biol. Chem., 110 , pp. 108040, 2024. Links | BibTeX @article{DBLP:journals/candc/TenekeciT24,
title = {Identifying promoter and enhancer sequences by graph convolutional
networks},
author = {Samet Tenekeci and Selma Tekir},
url = {https://doi.org/10.1016/j.compbiolchem.2024.108040},
doi = {10.1016/J.COMPBIOLCHEM.2024.108040},
year = {2024},
date = {2024-01-01},
journal = {Comput. Biol. Chem.},
volume = {110},
pages = {108040},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Hüseyin Ünlü; Samet Tenekeci; Can Çiftci; İbrahim Baran Oral; Tunahan Atalay; Tuna Hacaloğlu; Burcu Musaoğlu; Onur Demirörs Predicting Software Functional Size Using Natural Language Processing: An Exploratory Case Study Inproceedings 2024 50th Euromicro Conference on Software Engineering and Advanced Applications (SEAA), pp. 188–193, IEEE, 2024. Links | BibTeX @inproceedings{nl2024,
title = {Predicting Software Functional Size Using Natural Language Processing: An Exploratory Case Study},
author = {H\"{u}seyin \"{U}nl\"{u} and Samet Tenekeci and Can \c{C}iftci and \.{I}brahim Baran Oral and Tunahan Atalay and Tuna Hacalo\u{g}lu and Burcu Musao\u{g}lu and Onur Demir\"{o}rs},
url = {http://dx.doi.org/10.1109/SEAA64295.2024.00036},
doi = {10.1109/seaa64295.2024.00036},
year = {2024},
date = {2024-01-01},
booktitle = {2024 50th Euromicro Conference on Software Engineering and Advanced Applications (SEAA)},
pages = {188\textendash193},
publisher = {IEEE},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
|
2023
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Selma Tekir; Aybüke Güzel; Samet Tenekeci; Bekir Haman Quote Detection: A New Task and Dataset for NLP Inproceedings Proceedings of the 7th Joint SIGHUM Workshop on Computational Linguistics for Cultural Heritage, Social Sciences, Humanities and Literature, pp. 21–27, Association for Computational Linguistics, 2023. Links | BibTeX @inproceedings{Tekir2023,
title = {Quote Detection: A New Task and Dataset for NLP},
author = {Selma Tekir and Ayb\"{u}ke G\"{u}zel and Samet Tenekeci and Bekir Haman},
url = {http://dx.doi.org/10.18653/v1/2023.latechclfl-1.3},
doi = {10.18653/v1/2023.latechclfl-1.3},
year = {2023},
date = {2023-01-01},
booktitle = {Proceedings of the 7th Joint SIGHUM Workshop on Computational Linguistics for Cultural Heritage, Social Sciences, Humanities and Literature},
pages = {21\textendash27},
publisher = {Association for Computational Linguistics},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
|
2021
|
Huseyin Ünlü; Samet Tenekeci; Ali Yıldız; Onur Demirörs Event Oriented vs Object Oriented Analysis for Microservice Architecture: An Exploratory Case Study Inproceedings 2021 47th Euromicro Conference on Software Engineering and Advanced Applications (SEAA), pp. 244-251, 2021. Links | BibTeX @inproceedings{9582579,
title = {Event Oriented vs Object Oriented Analysis for Microservice Architecture: An Exploratory Case Study},
author = { Huseyin \"{U}nl\"{u} and Samet Tenekeci and Ali Yıldız and Onur Demir\"{o}rs},
url = {https://ieeexplore.ieee.org/document/9582579},
doi = {10.1109/SEAA53835.2021.00038},
year = {2021},
date = {2021-10-27},
booktitle = {2021 47th Euromicro Conference on Software Engineering and Advanced Applications (SEAA)},
pages = {244-251},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
|
Erhan Sezerer; Samet Tenekeci; Ali Acar; Bora Baloğlu; Selma Tekir Author Reputation Measurement on Question and Answer Sites by the Classification of Author-Generated Content Journal Article International Journal of Software Engineering and Knowledge Engineering, 31 (10), pp. 1421-1445, 2021. Links | BibTeX @article{doi:10.1142/S0218194021500479,
title = {Author Reputation Measurement on Question and Answer Sites by the Classification of Author-Generated Content},
author = { Erhan Sezerer and Samet Tenekeci and Ali Acar and Bora Balo\u{g}lu and Selma Tekir},
url = {https://doi.org/10.1142/S0218194021500479},
doi = {10.1142/S0218194021500479},
year = {2021},
date = {2021-01-01},
journal = {International Journal of Software Engineering and Knowledge Engineering},
volume = {31},
number = {10},
pages = {1421-1445},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Okan Çiftçi; Samet Tenekeci; Ceren Ülgentürk Artist Recommendation based on Association Rule Mining and Community Detection Inproceedings Proceedings of the 13th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management, pp. 257–263, 2021. Links | BibTeX @inproceedings{ciftci2021artist,
title = {Artist Recommendation based on Association Rule Mining and Community Detection},
author = {Okan \c{C}ift\c{c}i and Samet Tenekeci and Ceren \"{U}lgent\"{u}rk},
url = {http://dx.doi.org/10.5220/0010678600003064},
doi = {10.5220/0010678600003064},
year = {2021},
date = {2021-01-01},
booktitle = {Proceedings of the 13th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management},
pages = {257--263},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
|
2020
|
Samet Tenekeci; Zerrin Işık Integrative Biological Network Analysis to Identify Shared Genes in Metabolic Disorders Journal Article IEEE/ACM Transactions on Computational Biology and Bioinformatics, 19 (1), pp. 522–530, 2020, ISSN: 2374-0043. Links | BibTeX @article{Tenekeci2020,
title = {Integrative Biological Network Analysis to Identify Shared Genes in Metabolic Disorders},
author = {Samet Tenekeci and Zerrin I\c{s}ık},
url = {http://dx.doi.org/10.1109/TCBB.2020.2993301},
doi = {10.1109/tcbb.2020.2993301},
issn = {2374-0043},
year = {2020},
date = {2020-05-08},
journal = {IEEE/ACM Transactions on Computational Biology and Bioinformatics},
volume = {19},
number = {1},
pages = {522\textendash530},
publisher = {IEEE},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
